projectdata

Project data along eigenmodes

projectdata evecs <evecs dataset> [name <name>] [out <outfile>] [beg <beg>] [end <end>]{[dihedrals <dataset arg>] | [data <dataset arg> ...]}

evecs <dataset name> Data set containing eigenvectors (modes).
[name <name>] Output data set name.
[out <outfile>] Write projections to <outfile>.
[beg <beg>] First eigenvector/mode to use (default 1).
[end <end>] Final eigenvector/mode to use (default 2).
[dihedrals <dataset arg>] (Dihedral covariance only) Dihedral data sets to use in projection; MUST CORRESPOND TO HOW EIGENVECTORS WERE GENERATED.
[data <dataset arg>] (Data covariance only, e.g. from TICA). 1D data sets to use in projection; MUST CORRESPOND TO HOW EIGENVECTORS WERE GENERATED.

Data Sets Created:
<name>:<#> Projection data set for mode <#>.

Project data along previously generated eigenmodes from e.g. PCA or TICA. This is a faster alternative to the projection command  if only 1D data sets need to be projected.